Dragging / nudging even fairly small numbers of objects seems much slower in 7.16 than it did a few versions back. For instance, in this document (Dropbox link since I don’t have attach permissions), when I select the objects in blue at the bottom part of the graph and nudge them with the keyboard, each nudge takes about three seconds to display any visual feedback. The slowness seems to be independent of the zoom level.
Unfortunately, I don’t have an older version to compare, and I don’t use Omnigraffle that regularly, so I can’t say for sure how long it’s been like this, but this seems really high when we’re only talking about forty or so fairly simple objects, on a 21" Retina iMac, 2017 model, with a 3.6GHz i7 and 32GB RAM.